Detailed information of evm.model.HiC_scaffold_15.103 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_15:1156821...1166418
NR annotation: XP_047134717.1, cleavage and polyadenylation specificity factor subunit 6-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6NWC6Cleavage and polyadenylation specificity factor subunit 6 OS=Danio rerio OX=7955 GN=cpsf6 PE=2 SV=1
Q9VSH4Cleavage and polyadenylation specificity factor subunit 6 OS=Drosophila melanogaster OX=7227 GN=Cpsf6 PE=1 SV=2
Q0P5D2Cleavage and polyadenylation specificity factor subunit 6 OS=Bos taurus OX=9913 GN=CPSF6 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034772FamilyCPSF6/7 familyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR034769DomainCleavage and polyadenylation specificity factor subunit 6, RNA recognition motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23204CLEAVAGE AND POLYADENYLATION SPECIFIC FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0098789Biological Processobsolete pre-mRNA cleavage required for polyadenylationInterproscan
GO:0110104Biological ProcessmRNA alternative polyadenylationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14398CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7-Messenger RNA biogenesisko03019deepkoala

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