Detailed information of evm.model.HiC_scaffold_15.56 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_15:611852...631903
NR annotation: CAH3025921.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P46063ATP-dependent DNA helicase Q1 OS=Homo sapiens OX=9606 GN=RECQL PE=1 SV=3
Q5RF63ATP-dependent DNA helicase Q1 OS=Pongo abelii OX=9601 GN=RECQL PE=2 SV=1
Q6AYJ1ATP-dependent DNA helicase Q1 OS=Rattus norvegicus OX=10116 GN=Recql PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF16124RecQ_Zn_bindRecQ zinc-bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR032284DomainATP-dependent DNA helicase RecQ, zinc-binding domainInterproscan
IPR004589FamilyDNA helicase, ATP-dependent, RecQ typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13710DNA HELICASE RECQ FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006268Biological ProcessDNA unwinding involved in DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0009378Molecular Functionfour-way junction helicase activityInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan

TOP