Detailed information of evm.model.HiC_scaffold_15.73 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_15:846181...884671
NR annotation: CAB4028662.1, zinc finger MYM-type 1-like, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6PD62RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens OX=9606 GN=CTR9 PE=1 SV=1
Q62018RNA polymerase-associated protein CTR9 homolog OS=Mus musculus OX=10090 GN=Ctr9 PE=1 SV=2
Q4QR29RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis OX=8355 GN=ctr9 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF14559TPR_19Tetratricopeptide repeatRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR006580DomainZinc finger, TTF-typeInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR031101FamilyRNA polymerase-associated protein Ctr9Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14027RNA POLYMERASE-ASSOCIATED PROTEIN CTR9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0016593Cellular ComponentCdc73/Paf1 complexInterproscan

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