Detailed information of evm.model.HiC_scaffold_155.10 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_155:92404...105816
NR annotation: XP_004209346.2, uncharacterized protein LOC100214827 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5XHH7E3 ubiquitin-protein ligase synoviolin B OS=Xenopus laevis OX=8355 GN=syvn1-b PE=2 SV=1
Q6NRL6E3 ubiquitin-protein ligase synoviolin A OS=Xenopus laevis OX=8355 GN=syvn1-a PE=2 SV=1
Q803I8E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR023780DomainChromo domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR051493FamilyChromodomain-helicase-DNA-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46850CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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