Detailed information of evm.model.HiC_scaffold_158.9 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_158:213937...218913
NR annotation: CAB4011477.1, hypothetical protein DSY43_03210 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P57756Ficolin-2 OS=Rattus norvegicus OX=10116 GN=Fcn2 PE=2 SV=1
Q9Y264Angiopoietin-4 OS=Homo sapiens OX=9606 GN=ANGPT4 PE=1 SV=1
O70497Ficolin-2 OS=Mus musculus OX=10090 GN=Fcn2 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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