Gene detail

Detailed information of evm.model.HiC_scaffold_16.106 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_16:1536503...1557240
NR annotation: XP_012555808.1, uncharacterized protein LOC101241166 isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03146	NtA	Agrin NtA domain	Domain	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008993	Homologous_superfamily	Tissue inhibitor of metalloproteinases-like, OB-fold	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR050969	Family	Developmental Signaling Modulators	Interproscan
IPR004850	Domain	NtA (N-terminal agrin) domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14949	EGF-LIKE-DOMAIN, MULTIPLE 7, 8	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043113	Biological Process	receptor clustering	Interproscan
GO:0043236	Molecular Function	laminin binding	Interproscan