Gene detail

Detailed information of evm.model.HiC_scaffold_16.385 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_16:4981493...4986209
NR annotation: XP_047135148.1, NACHT, LRR and PYD domains-containing protein 3-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_16.385

ATGGATACGGATGAAGTGGTCATCGCAGTTGATCTTTTCCAGCAGCTTGGCTTACAGAAACTGCGGATAAAAGTTCGCTGCGACGATATTCGAGAAAGGTATAGAGCAAAATGCAAGGAGCATAAAGTAAACTTCATAAATGCTGACAAAGAAGTTCAAATTGTGTCGTTTCCAATAGAAGAGTTTGCAGTTAAGGTCAAAATTATTCTTGAACGACAAAGCGAGGTTAGAATTATTCAAGAGCGGAAAATTGGGGAATCTTATTatgatgaaatgaagaaattcttcAAGAGGCTTAAAGATTATGGTAGACATATCAACATTGATGATCTATTTAATGATGACGAACACCGCATTGTGTTTATTCAAGGGATTGCCGGAATTGGCAAATCCTTCCTTGCAAAACAAATTGCATTTAAATGGGCGAATGGTGACATTTACAATAAATTTTCCCATGTTCTTTTTTTTGAATGCAGAGATTTTAATGCTTATCGCAGCTGCAACGAAGGGAAAGGTCTTGACAATCTTATTGAAGATTTTCTTGCAGAGAAGTTTAGCTCTGTTACTTGTAGAAATGACAGTAATGTCCTCTTTTTAATTGATGGCTTGGACGAGTTAAAGAACAAGAAGtcaacaatttataaaataatttcgCTGTTCAGTAAGTCAAAGTTTATCATGCTTGGAAGACCCCATGTACAAAACATTTTTACAAAGTGTCCCGAAGATATACATATAAAGTACAAAGTAATGGAAATATTGGGTCTTGGTGATGAAGAAATTGAGGACTATATTGAGAAGTTTTCGAAACTAGAAGAAAAGATTGAAAAGCGCGAAGATATAAAGAAGTCAATAAAAGATACGATTGATAACTCAGAAAGTTTGACTGGCATCAAAACTGTCCCGCAATTTTTACACACGCTATGCTGTGTAGCAATCTTAAGGAATGGACTGGAAATATCCAGTGTAACTGGTTTGTACGGGTGGACATTTTTCTTGCTGTTAAAGCAACATTTGCATCAAAAGAACCCGGGAGAGGAACGCGATGATATTCGGTATTTACTTTCAAAATATTCCAGTGTTATAAAATCCATCAGTACAGTTGCATATAAATTGTATATCGATAAGAAAGTAATATTTGGGAAGAAAGACCTAGAGTTGCTTGTGAAAGAAACTCATGGATTTGGTGCACTGCAAAATGATTTTGTGACCTTTTTCAAAGAAACCGAAGGATTAGATGAGCTGcaaacaaacttttttgaaagtttattcGTCAATGTATCAAATAGTTTTGGACAAAAGCATCAGTTTAAGCATTTGACGATGATGGAGTTTTTTGCGTCAATGTACTTCTATTTTGCTGACGACAGAGACCAAGTAATTTGTGAATTTTTGAGAAATGAATCGTATGAATGTATTTCGTTTATTTGCTGTTTTGAGGGGCGTCGCTTGGTAGCGAATGTTCCTGAAGATGATATTCTTCATTGTTTTGTCAATGAAATCAATAGAAATCGCAGAGCAACAAACTCGCCAGTTATAGCTCAAGTTTTGAGCAAAGTTTCATTGGGTTTGTCGTTTAGGTATTTACATGATACGTTCAAACCAACTGACCGGGTTAAAGATACACAATTCTTAAATAAACTACTTGGAAAGATACAACCAGATAGATATTTCTGGGAGagaaaacgtgaaaaagaaattgattttGAGCCAAGTGAAGTAGACCAAGCTAACATTTACAATGCTGTTCTACTGGCCAAGGATAATGGCATTAGCGATAAACGCTTGAGAAGTGTTTTTAAAGGTATTCGATTGACTCTGGATTTGAAATTCATCAAAGTTATGGAATACGTAGATCTGTTTGATGGAGTTTATATCACCTTGAACTATACTAAGATATCAGAGGATGAAATGAGACTTTTTGCGGTAAACGCAATTCATTGTCGTTCGGTAATGTTTGCGGGTTGtgaatttattgcagaaatatGGGAAAAATTGTTACAGAATCTGAAAGACAAAGAAAGTTACCGTTTGCAAGGAATATATATTCTTTATATGGATGTTGCTGATGGGTCTGTGGAGTTTTTTGCAGAAACACTAACAAGGATAGAAACAGTTTGGTTGAAAAGTATTCGTATCGATGAAATCTTTTGGGCGGAAAAATTACTAAAATGGATATCAATTGCCAAGGAaaagcaaaaattgaaattgaaaaaaatctttTATTCGGACTGTCCATCCTTGAATGATGACCTAAAGAGAAAGGACAACACCTGGGTTAACGATCAAATGGAAACTGTACGTCAAAATTTCGACAGTTGA

Transcript

evm.model.HiC_scaffold_16.385

Protein

Uniprot

Uniprot term	Description
Q6B966	NACHT, LRR and PYD domains-containing protein 14 OS=Mus musculus OX=10090 GN=Nlrp14 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729	NACHT	NACHT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050637	Family	NLRP family, innate immunity and inflammation regulators	Interproscan
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45690	NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan