Gene detail

Detailed information of evm.model.HiC_scaffold_16.553 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_16:7369246...7370978
NR annotation: XP_011678644.2, ATP-dependent DNA helicase PIF1-like [Strongylocentrotus purpuratus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7ZV90	ATP-dependent DNA helicase PIF1 OS=Danio rerio OX=7955 GN=pif1 PE=2 SV=1
Q1HG60	ATP-dependent DNA helicase PIF1 OS=Rattus norvegicus OX=10116 GN=Pif1 PE=2 SV=1
Q9H611	ATP-dependent DNA helicase PIF1 OS=Homo sapiens OX=9606 GN=PIF1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21530	Pif1_2B_dom	DNA helicase Pif1, 2B domain	Domain	Interproscan
PF05970	PIF1	PIF1-like helicase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR049163	Domain	DNA helicase Pif1-like, 2B domain	Interproscan
IPR010285	Family	DNA helicase Pif1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10492	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000723	Biological Process	telomere maintenance	Interproscan
GO:0003678	Molecular Function	DNA helicase activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06947	GRC3, NOL9; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9	EC:2.7.1.-	Ribosome biogenesis	ko03009	deepkoala