Detailed information of evm.model.HiC_scaffold_16.84 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_16:1244472...1266341
NR annotation: XP_047136943.1, sorting nexin-13 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PHS6Sorting nexin-13 OS=Mus musculus OX=10090 GN=Snx13 PE=2 SV=1
Q9Y5W8Sorting nexin-13 OS=Homo sapiens OX=9606 GN=SNX13 PE=1 SV=4
Q9USN1Sorting nexin-12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=snx12 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787PXPX domainDomainInterproscan
PF08628Nexin_CSorting nexin C terminalFamilyInterproscan
PF02194PXAPXA domainFamilyInterproscan
PF00615RGSRegulator of G protein signaling domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR036305Homologous_superfamilyRGS domain superfamilyInterproscan
IPR001683DomainPhox homologyInterproscan
IPR013937DomainSorting nexin, C-terminalInterproscan
IPR003114DomainPhox-associated domainInterproscan
IPR044926Homologous_superfamilyRGS, subdomain 2Interproscan
IPR016137DomainRGS domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22775SORTING NEXINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17925SNX13; sorting nexin-13-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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