Detailed information of evm.model.HiC_scaffold_16.97 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_16:1437872...1477363
NR annotation: XP_012559044.2, partitioning defective 3 homolog isoform X4 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6L8F3Zinc transporter ZIP6 OS=Danio rerio OX=7955 GN=slc39a6 PE=2 SV=1
Q504Y0Zinc transporter ZIP12 OS=Homo sapiens OX=9606 GN=SLC39A12 PE=1 SV=3
Q99NH2Partitioning defective 3 homolog OS=Mus musculus OX=10090 GN=Pard3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF21116EF-hand_ZipZip protein EF-handDomainInterproscan
PF12053Par3_HAL_N_termN-terminal of Par3 and HAL proteinsFamilyInterproscan
PF02535ZipZIP Zinc transporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR052213FamilyPartitioning defective 3 homologInterproscan
IPR001478DomainPDZ domainInterproscan
IPR049406DomainZinc transporter ZIP4/12, EF-handInterproscan
IPR021922DomainPar3/HAL, N-terminalInterproscan
IPR003689FamilyZinc/iron permeaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16484PARTITIONING DEFECTIVE 3 RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0008104Biological Processprotein localizationInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0030010Biological Processestablishment of cell polarityInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043296Cellular Componentapical junction complexInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0051660Biological Processestablishment of centrosome localizationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030001Biological Processmetal ion transportInterproscan
GO:0046873Molecular Functionmetal ion transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14716SLC39A10, ZIP10; solute carrier family 39 (zinc transporter), member 10-Transportersko02000deepkoala

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