Gene detail

Detailed information of evm.model.HiC_scaffold_160.40 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_160:532494...550254
NR annotation: XP_012557503.1, protein PALS1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
E2QY99	Protein PALS1 OS=Canis lupus familiaris OX=9615 GN=PALS1 PE=1 SV=1
Q8N3R9	Protein PALS1 OS=Homo sapiens OX=9606 GN=PALS1 PE=1 SV=3
Q5RDQ2	Protein PALS1 OS=Pongo abelii OX=9601 GN=PALS1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF02828	L27	L27 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR001478	Domain	PDZ domain	Interproscan
IPR036892	Homologous_superfamily	L27 domain superfamily	Interproscan
IPR014775	Domain	L27 domain, C-terminal	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR050716	Family	Membrane-associated guanylate kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23122	MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005911	Cellular Component	cell-cell junction	Interproscan