Gene detail

Detailed information of evm.model.HiC_scaffold_160.49 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_160:697612...719977
NR annotation: CAH3140780.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_160.49

ATGGGTGAGCCTCCCGTTTCTGACCAGCAGAAGAAACGACAAATTTCTGTCCGAAGAATAGCAGCAGTTGAGGATATAGCAAGCATAAAGGAGAAGTTCAACAGACATCTCCATTTTACTGTTGTGAAAGACAGAAATGTGGCAACAAAACACGACTTCTATCTCTCTTTGGTGCACTCTGTGTGGGAGTATCTGGTGCATAAATGGATCCGAACTCAACAGCTGTATTACCAAAAAGACCCAAAGCGTGTTTACTACTTGTCTTTGGAGTATTATCTTGGAAGAAGTTTGTCAAATACAATGATGAATCTTGATATCAGTGAGATTTGTGATGAAGCAATGGACCAGTTGGGTCTTGATCTTCAAGAGCTTCAAGATCAAGAAATGGATGCAGGTCTTGGCAATGGAGGTCTTGGGCGATTAGCTGCATGTTTTATGGATTCATTGGCAACACTTGGTATTGCTGCACATGGCTATGGGTTAAGATATGACTATGGGATATTTGAGCAAAAGATTATCCATGGAGAACAGGTAGAATTTCCTGATGACTGGTTGAAATATGGCAGTCCTTGGGAGAAAGGACGTCCTGAGTACACCGTCCCAATTCATATGTTTGGCAAAGTAAAGTGTGACAAAGAAGGGTTTAATTGTGAATGGGTTGATACAGAAGTTGTTCATGCTGTTGCTTATGATGTACCTGTGGCTGGTTACGGCAACAAAGTTGTCAATACTATTCGACTGTGGTCTGCGAAATCTCCAGAAGACTTTGATCTCTCATACTtTATGGGAGGTGATTATATTAAAGCTGTCCTGAAGCGCAACAAAGCAGAAAACATAACAAGAGTCTTATATCCAAATGATAATTTTTTTGAAGGCAAAGAATTGAGATTGAAGCAAGAATACTTGATGGTTGCTGCTACCCTTCATGACATCATTCGAAGGTATCAACATGCTGAGTATGCTGGCAACGTCACCAGGAAGTCTTTTGAACAATTCCCGGATAAGGTTGCTATTCAACTCAATGACACACATCCAGCACTTGCTATTCCAGAACTCATGAGAATATTTGTTGACATCGAAAAGATTCCATGGGACAAGGCCTGGGACATATGCTTTCGTACCTTTGCTTATACAAACCATACAGTCCTTCCCGAAGCATTGGAAAGATGGTCAACCTCGCTGCTTGATAAAGTTCTTCCACGTCATCTTATGATTATTTATGCAATCAACAGCCTTCACTTAAAGaAAGTCGGTGAGATGTGGCCAGGTGACATGGACAAACTTCGTGAAATagcgaagttgcttataaaaaaattgcgtgtaaacttacgttttctgcctcgttctcatattaccatggttacagttatgtcaacgAAAATTGACGAGAATTGGATAACTAATCTGGACGAGCTAAGCAAACTCAAAGTATTATGTGAACAGCCTAAATTCATGAAGGAGGTTATGAGAGTAAAACAGGAAAATAAAATCAGATTTGCTGCTTACATCAAAGAACATTATAACATTGATGTGAATGTTGACTCGATTTTTGATGTCCAAGTGAAGCGAATCCACGAATACAAGAGACAGCTATTGAATGCACTTCATATCATCATATTATATAACAGTAAGTACTGCAGGGAATTTTTAATGTACTATGTGATAAGGCAATTTCCCCGTAGGCCCGCAGCCGCTCCTGGATACCACGCAGCAAAACAGATTATCAAACTCATTGTTGGTATTGCCAAAGTTATCAACAATGATCCCATTGTTGGAGACAGGCTCAAAGTTGTCTTCTTAGAGAACTACAGAGTATCTCTTGCCGAGAAGATTATCCCTGCAGCTGATTTATCCGAGCAGATTTCTCTTGCGGGAACCGAGGCATCTGGAACAGGAAATATGAAATTTATGTTAAATGGCGCATTAACCATTGGAACACTGGATGGTGCAAATGTAGAAATGAGAGAAGAAATGGGTGCTGATAATATCTTCATTTTTGGCATGACAGTTGAGGAGGTGGAAGAACTAAGAGCGAAAGGGTACAAGCCAATCGAATACTACAAGAAAAACCCAGATCTCAAGAAAGCGATTGATCTCATTCGAAGTGGATTGTTTTCTCCTAATAATCTTGATGAATTCAAAGACCTGGTTAACGACCTACTCTACCATGACAGGTTTTTACTTcttgctgatttcgaatcttaTATTGAATGTCAAGATAGAGTCAGTGAATGTTATCAGGATCAAATCTCCTGGCTTCGAATGTGCATTATGAATATCGCAAGTTCTGGTAAATTCTCAAGCGATCGTACGATTCTTGAGTACGCAAAAGAGATTTGGAATGTGGAACCAGCCCTTCCTAAAGGGTTAGAAGAAGAATGA

Transcript

evm.model.HiC_scaffold_160.49

Protein

Uniprot

Uniprot term	Description
Q9WUB3	Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3
P11217	Glycogen phosphorylase, muscle form OS=Homo sapiens OX=9606 GN=PYGM PE=1 SV=6
Q9XTL9	Glycogen phosphorylase OS=Drosophila melanogaster OX=7227 GN=Glyp PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00343	Phosphorylase	Carbohydrate phosphorylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000811	Family	Glycosyl transferase, family 35	Interproscan
IPR035090	Conserved_site	Phosphorylase pyridoxal-phosphate attachment site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11468	GLYCOGEN PHOSPHORYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0008184	Molecular Function	glycogen phosphorylase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005980	Biological Process	glycogen catabolic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00688	PYG, glgP; glycogen phosphorylase	EC:2.4.1.1	Insulin resistance	ko04931	deepkoala