Detailed information of evm.model.HiC_scaffold_163.1 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_163:4945...28986
NR annotation: XP_027041592.1, probable E3 ubiquitin-protein ligase HECTD2 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8CDU6Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus OX=10090 GN=Hectd2 PE=1 SV=2
Q5RD78Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii OX=9601 GN=HECTD2 PE=2 SV=1
Q5U5R9Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens OX=9606 GN=HECTD2 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF01168Ala_racemase_NAlanine racemase, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029066Homologous_superfamilyPLP-binding barrelInterproscan
IPR011078FamilyPyridoxal phosphate homeostasis proteinInterproscan
IPR000569DomainHECT domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR001608DomainAlanine racemase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10146PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan

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