Detailed information of evm.model.HiC_scaffold_163.6 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_163:99744...113776
NR annotation: CAH1230386.1, D2HGDH [Branchiostoma lanceolatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1L258D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Danio rerio OX=7955 GN=d2hgdh PE=2 SV=1
P84850D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=1 SV=1
Q1JPD3D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Bos taurus OX=9913 GN=D2HGDH PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01565FAD_binding_4FAD binding domain DomainInterproscan
PF02913FAD-oxidase_CFAD linked oxidases, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016164Homologous_superfamilyFAD-linked oxidase-like, C-terminalInterproscan
IPR016166DomainFAD-binding domain, PCMH-typeInterproscan
IPR036318Homologous_superfamilyFAD-binding, type PCMH-like superfamilyInterproscan
IPR016171Homologous_superfamilyVanillyl-alcohol oxidase, C-terminal subdomain 2Interproscan
IPR051264FamilyFAD-binding Oxidoreductase/Transferase Type 4Interproscan
IPR006094DomainFAD linked oxidase, N-terminalInterproscan
IPR004113DomainFAD-binding oxidoreductase/transferase, type 4, C-terminalInterproscan
IPR016167Homologous_superfamilyFAD-binding, type PCMH, subdomain 1Interproscan
IPR016169Homologous_superfamilyFAD-binding, type PCMH, subdomain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43716D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18204D2HGDH; D-2-hydroxyglutarate dehydrogenaseEC:1.1.99.39
Enzymes with EC numbers-deepkoala

TOP