Detailed information of evm.model.HiC_scaffold_17.310 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_17:4206102...4245291
NR annotation: XP_047140440.1, ras-specific guanine nucleotide-releasing factor 1-like isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2CEA7Ras-specific guanine nucleotide-releasing factor 2 OS=Danio rerio OX=7955 GN=rasgrf2 PE=3 SV=1
P28818Ras-specific guanine nucleotide-releasing factor 1 OS=Rattus norvegicus OX=10116 GN=Rasgrf1 PE=1 SV=1
P27671Ras-specific guanine nucleotide-releasing factor 1 OS=Mus musculus OX=10090 GN=Rasgrf1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF00612IQIQ calmodulin-binding motifMotifInterproscan
PF00618RasGEF_NRasGEF N-terminal motifDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001849DomainPleckstrin homology domainInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR000651DomainRas-like guanine nucleotide exchange factor, N-terminalInterproscan
IPR000048Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR023578Homologous_superfamilyRas guanine nucleotide exchange factor domain superfamilyInterproscan
IPR036964Homologous_superfamilyRas guanine-nucleotide exchange factor, catalytic domain superfamilyInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR051092FamilyFYVE, RhoGEF and PH domain-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12673FACIOGENITAL DYSPLASIA PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0005089Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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