Detailed information of evm.model.HiC_scaffold_17.311 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_17:4254280...4259067
NR annotation: XP_047142583.1, uncharacterized protein LOC124816903 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q38PU3Glutamate receptor ionotropic, kainate 2 OS=Macaca fascicularis OX=9541 GN=GRIK2 PE=2 SV=1
A0A2R8QF68Glutamate receptor ionotropic, kainate 2 OS=Danio rerio OX=7955 GN=grik2 PE=3 SV=1
Q13002Glutamate receptor ionotropic, kainate 2 OS=Homo sapiens OX=9606 GN=GRIK2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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