Detailed information of evm.model.HiC_scaffold_17.34 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_17:376689...383458
NR annotation: XP_012554057.2, zinc finger protein ubi-d4 B isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q61103Zinc finger protein ubi-d4 OS=Mus musculus OX=10090 GN=Dpf2 PE=1 SV=1
Q92785Zinc finger protein ubi-d4 OS=Homo sapiens OX=9606 GN=DPF2 PE=1 SV=2
P58270Zinc finger protein DPF3 OS=Gallus gallus OX=9031 GN=DPF3 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14051DPF1-3_NDPF1-3, N-terminalFamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR025750DomainDPF1-3, N-terminal domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45888HL01030P-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0042800Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

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