Gene detail

Detailed information of evm.model.HiC_scaffold_17.38 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_17:460884...465841
NR annotation: XP_001640605.1, 50S ribosomal protein L4 [Nematostella vectensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5L3Z6	Large ribosomal subunit protein uL4 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rplD PE=3 SV=1
P28601	Large ribosomal subunit protein uL4 OS=Geobacillus stearothermophilus OX=1422 GN=rplD PE=1 SV=1
B7GJ68	Large ribosomal subunit protein uL4 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) OX=491915 GN=rplD PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00573	Ribosomal_L4	Ribosomal protein L4/L1 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023574	Homologous_superfamily	Large ribosomal subunit protein uL4 domain superfamily	Interproscan
IPR002136	Family	Large ribosomal subunit protein uL4	Interproscan
IPR013005	Family	Large ribosomal subunit protein uL4-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10746	50S RIBOSOMAL PROTEIN L4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02926	RP-L4, MRPL4, rplD; large subunit ribosomal protein L4	-	Ribosome	ko03011	deepkoala