Detailed information of evm.model.HiC_scaffold_17.95 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_17:1079672...1088811
NR annotation: XP_048585793.1, E3 ubiquitin-protein ligase synoviolin A [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5XHH7E3 ubiquitin-protein ligase synoviolin B OS=Xenopus laevis OX=8355 GN=syvn1-b PE=2 SV=1
Q6NRL6E3 ubiquitin-protein ligase synoviolin A OS=Xenopus laevis OX=8355 GN=syvn1-a PE=2 SV=1
Q803I8E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR050731FamilyHRD1 family E3 ubiquitin-protein ligasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22763RING ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10601SYVN1, HRD1; E3 ubiquitin-protein ligase synoviolinEC:2.3.2.27
Ubiquitin systemko04121deepkoala

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