Detailed information of evm.model.HiC_scaffold_170.1 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_170:3049...28647
NR annotation: XP_031571469.1, E3 ubiquitin-protein ligase ZSWIM2-like isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8NEG5E3 ubiquitin-protein ligase ZSWIM2 OS=Homo sapiens OX=9606 GN=ZSWIM2 PE=1 SV=2
Q9D9X6E3 ubiquitin-protein ligase Zswim2 OS=Mus musculus OX=10090 GN=Zswim2 PE=1 SV=1
Q8WYK1Contactin-associated protein-like 5 OS=Homo sapiens OX=9606 GN=CNTNAP5 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01390SEASEA domainFamilyInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF04434SWIMSWIM zinc fingerDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR000082DomainSEA domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR039903FamilyE3 ubiquitin-protein ligase Zswim2Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21540RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

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