Detailed information of evm.model.HiC_scaffold_170.20 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_170:313912...336964
NR annotation: XP_002741523.1, PREDICTED: E3 ubiquitin-protein ligase TRIM33-like [Saccoglossus kowalevskii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5D7J2Tripartite motif-containing protein 5 OS=Papio anubis OX=9555 GN=TRIM5 PE=3 SV=1
Q5C8U3Tripartite motif-containing protein 5 OS=Chlorocebus tantalus OX=60712 GN=TRIM5 PE=2 SV=1
Q587N7Tripartite motif-containing protein 5 OS=Chlorocebus aethiops OX=9534 GN=TRIM5 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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