Gene detail

Detailed information of evm.model.HiC_scaffold_170.28 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_170:448665...457011
NR annotation: XP_006822978.1, PREDICTED: peroxisome biogenesis factor 2-like [Saccoglossus kowalevskii]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
A0A1L8FZ98	Peroxisome biogenesis factor 2 OS=Xenopus laevis OX=8355 GN=pex2.L PE=3 SV=1
P55098	Peroxisome biogenesis factor 2 OS=Mus musculus OX=10090 GN=Pex2 PE=2 SV=1
P24392	Peroxisome biogenesis factor 2 OS=Rattus norvegicus OX=10116 GN=Pex2 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04757	Pex2_Pex12	Pex2 / Pex12 amino terminal region	Family	Interproscan
PF13920	zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR006845	Domain	Pex, N-terminal	Interproscan
IPR025654	Family	Peroxisome biogenesis factor 2/10	Interproscan
IPR045859	Domain	Peroxisome biogenesis factor 2, HC subclass-RING finger domain	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48178	PEROXISOME BIOGENESIS FACTOR 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005778	Cellular Component	peroxisomal membrane	Interproscan
GO:0007031	Biological Process	peroxisome organization	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016558	Biological Process	protein import into peroxisome matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06664	PEX2, PXMP3; peroxin-2	-	Ubiquitin system	ko04121	deepkoala