Gene detail

Detailed information of evm.model.HiC_scaffold_173.7 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_173:137930...153592
NR annotation: XP_020916691.1, anaphase-promoting complex subunit 7 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_173.7

GTGTACTACAACCAAGCTTTAGTTCAAAGAAAAATGCTAGCCAAAATCAAACCAAAGGCATCATCAATGCAGGGTGTTGACACTGAAGTAGAATTGAGGTTCAAAATCTATCAGTGCCACATGAAACTGAGAGAATACAGGGACGCAATTTGTTTGTTAGAAGGAATCAGCTTAAAGCAAAGAACACCAAAAGTAAATATGGCATTAGCAAAACTGTACCAAAAGCAAGGCATGGAGAGATCAGCAATAACTTGTTATAAAGAGGTTTTGAGAGTTTGCCCATTCGCTCTTGATGCTGTTAGTAATGTACTTTCCCTTGGTGTTCCTGTCCAAGAAGTGATCTCGCTTCTTAACCTTTCACTTACATCAAGTGGATTAGGATCTATACCAGATTGGATGTCTCTGTTTATCAAAGGACAGTCGTTCGCATCGCTGAATAAGCACACAAAAGCAGCTCAAGTATTCAAGAGTCTAGAAAACCAGACCCTGAGAGACAACATTAATGTTATTTGCTGCCAAGCTGAATCTCACTGGAGATCTGGAGACAAAGCTAATGCTATAAATTGCTACAAACGTGTTCGAGAGCTTGATCCTGCGTGTCTTAATGGAATGGATATCTATTCTCACATATTAGCAGAGGATTCTTCAGCGACTGGTGAACTAGAAACCCTTGCTCAAGACCTAGCACGAGTGAGTCAGATTAAAACTGAACCTTGGGTAGCAATGGCACAATACTGTTCATGCACTAATCGACAAACTCGGGCTGTTTACTTCGCACAAAAGGTAAAAGGACCACTTTTCTTTACAAAAGAAGACTGTTTTTATGAATACGGAGCTTCCCTATTACAGTctttgaagaaacaaaatgaGGCGTTCATACATTATAGAGAAGCAATTAGGTTAGCACCGACTTACTTCGAAGCTTATCAAGGATTAGTTGATTGTTACATTTCATCTGGTCAGACACGTGAAGCTATAACTATTGCAAGGAATGCTTTTAAAACAATTGGTACAAACGCTAGAACACTAACTATGTACGCTGGAGTGCTTACCAAGGACCCTCAAACTAGAGACAAGGCCAAGACAGTACTAGAGAAAGCATTGGCAAGCAACGCTTCATACCTTCCAGCTGCATACCTTCTCGTCGACATTCTCATGAAAGAGAGAAACTTCGACTCAGCTATTTTTCTTCTGCGAAAACAGCTAGAGCTACAGTCAACTGCTCGGTTGCATCAGCAACTTGGAGACTGTTTATGTGAGAAGAATTTAAGAACAGAAGCATTAGAGCACTACCACAGAGCAATGGTACTTACACCGAATGCAATGAGGAACCCAGATGAACTTAAAAATGCTGAACTGGTGCTTTCAAAAGAGAGTGAGCCAAACGTAATCAATTTCTCACCGCAAGATTCTTCTTATCAGAATGACGTTACTCAAGAGGCAATGGAAGACGATTCCCCGCTTGATCAAGAAATGACAGCGATCTACTTCATCGGTGGAGTTCGAGTACCGTTTCCAGCAAAGGCATACCCAAGCCAGATCACCATGATGCATAAGATCATCAGAGGATTAGATAGAAAACAAAATTGTTTACTGGAAAGTCCTACAGGAAGTGGTAAAACGCTTGCTCTGTTGTGCTCAAGTCTTGCCTGGCAGAAACATGAGAGAGaaaaagcaaaaactcCAAAATCCTCAGGTGAGAAAAAACCAGAAACCCTTGTACCACCCAATAATGAAATTGGAGAgcattcaaaatattttgatgcCAACAAGAATGATTTGCAAGACACAGTGAAGGATGCAGCTGAAGCCAAATTTGTCTCCCCTATTCCTCCATCTACATCAAGTTTTGCAGATGGTGATGTTGGAAATGATGATAGTGACCCTGACTTTCAATCTGCAAGAAAAAGATTTAGAACACCATCTGGGGGATTGCCTAATTCAAAGAGGCAGAAGAGCTTGGAAACACCAATAGAGCCAGTTCCAAATGTCGATCTTAAGGAGCCACCAGTTGCTCCACCTAACTGGAAAATGGAACTCACAACAGATGCTACAAAAACACCTGAAGCTTTGATTGATGAAGAGAAGTTGagaattttgaggaaaaatatGAGTGACGAGGAAAAAATGAAGCAAGATAAGCCAAGGTAG

Transcript

evm.model.HiC_scaffold_173.7

Protein

Uniprot

Uniprot term	Description
Q9UJX3	Anaphase-promoting complex subunit 7 OS=Homo sapiens OX=9606 GN=ANAPC7 PE=1 SV=5
Q9WVM3	Anaphase-promoting complex subunit 7 OS=Mus musculus OX=10090 GN=Anapc7 PE=1 SV=3
Q9BX63	Fanconi anemia group J protein OS=Homo sapiens OX=9606 GN=BRIP1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR014013	Domain	Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12558	CELL DIVISION CYCLE 16,23,27	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005680	Cellular Component	anaphase-promoting complex	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0045842	Biological Process	positive regulation of mitotic metaphase/anaphase transition	Interproscan
GO:0051301	Biological Process	cell division	Interproscan