Detailed information of evm.model.HiC_scaffold_18.151 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_18:1682655...1685870
NR annotation: XP_031565000.1, E3 ubiquitin-protein ligase RNF13-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5XIL0E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1
Q9H6Y7E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1
Q91XF4E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02225PAPA domainFamilyInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003137DomainPA domainInterproscan
IPR046450Homologous_superfamilyPA domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46539E3 UBIQUITIN-PROTEIN LIGASE ATL42Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15692RNF13, RZF; E3 ubiquitin-protein ligase RNF13EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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