Detailed information of evm.model.HiC_scaffold_18.256 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_18:2803195...2822967
NR annotation: XP_031565185.1, uncharacterized protein LOC116300447 isoform X3 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWY9Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 3DomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR000082DomainSEA domainInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR001638DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP