Detailed information of evm.model.HiC_scaffold_18.345 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_18:4268739...4290641
NR annotation: CAH3020660.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99MR8Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=2
Q5I0C3Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1
Q96RQ3Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Homo sapiens OX=9606 GN=MCCC1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01090Ribosomal_S19eRibosomal protein S19eFamilyInterproscan
PF03987Autophagy_act_CAutophagocytosis associated protein, active-site domain DomainInterproscan
PF02786CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan
PF00289Biotin_carb_NBiotin carboxylase, N-terminal domainDomainInterproscan
PF02785Biotin_carb_CBiotin carboxylase C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005479DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR018277Conserved_siteSmall ribosomal subunit protein eS19, conserved siteInterproscan
IPR001266FamilySmall ribosomal subunit protein eS19Interproscan
IPR011761DomainATP-grasp foldInterproscan
IPR016185Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR007135FamilyUbiquitin-like-conjugating enzyme Atg3/Atg10Interproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR011764DomainBiotin carboxylation domainInterproscan
IPR011054Homologous_superfamilyRudiment single hybrid motifInterproscan
IPR005482DomainBiotin carboxylase, C-terminalInterproscan
IPR005481DomainBiotin carboxylase-like, N-terminal domainInterproscan
IPR050856FamilyBiotin-dependent Carboxylase ComplexInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18866CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0019787Molecular Functionubiquitin-like protein transferase activityInterproscan
GO:0004485Molecular Functionmethylcrotonoyl-CoA carboxylase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

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