Detailed information of evm.model.HiC_scaffold_18.44 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_18:567465...582860
NR annotation: XP_029202173.2, harmonin-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y6N9Harmonin OS=Homo sapiens OX=9606 GN=USH1C PE=1 SV=3
Q80VW5Whirlin OS=Mus musculus OX=10090 GN=Whrn PE=1 SV=3
Q9P202Whirlin OS=Homo sapiens OX=9606 GN=WHRN PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR051844FamilySensory Perception USH2 Complex ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23116PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

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