Detailed information of evm.model.HiC_scaffold_18.89 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_18:1130497...1140069
NR annotation: CAH3030275.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8IZP7Heparan-sulfate 6-O-sulfotransferase 3 OS=Homo sapiens OX=9606 GN=HS6ST3 PE=1 SV=3
Q76LW2Heparan-sulfate 6-O-sulfotransferase 2 OS=Gallus gallus OX=9031 GN=HS6ST2 PE=1 SV=1
Q9QYK4Heparan-sulfate 6-O-sulfotransferase 3 OS=Mus musculus OX=10090 GN=Hs6st3 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyESR-like
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyRXR-like
Transcription Factors FamilySF-like
Transcription Factors FamilyGCNF-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan
PF03567Sulfotransfer_2Sulfotransferase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050274FamilyNuclear hormone receptor family NR2 subfamilyInterproscan
IPR001723FamilyNuclear hormone receptorInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR005331FamilySulfotransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24083NUCLEAR HORMONE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan
GO:0008146Molecular Functionsulfotransferase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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