Detailed information of evm.model.HiC_scaffold_181.15 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_181:187006...200224
NR annotation: XP_020911087.1, sterol regulatory element-binding protein 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q60416Sterol regulatory element-binding protein 1 OS=Cricetulus griseus OX=10029 GN=SREBF1 PE=2 SV=1
Q9WTN3Sterol regulatory element-binding protein 1 OS=Mus musculus OX=10090 GN=Srebf1 PE=1 SV=4
P56720Sterol regulatory element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Srebf1 PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46062STEROL REGULATORY ELEMENT-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

TOP