Gene detail

Detailed information of evm.model.HiC_scaffold_2.24 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:420819...426331
NR annotation: KAI8514756.1, E3 ubiquitin-protein ligase ubr1 [Branchiostoma belcheri]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q6WKZ8	E3 ubiquitin-protein ligase UBR2 OS=Mus musculus OX=10090 GN=Ubr2 PE=1 SV=2
Q8IWV8	E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens OX=9606 GN=UBR2 PE=1 SV=1
O70481	E3 ubiquitin-protein ligase UBR1 OS=Mus musculus OX=10090 GN=Ubr1 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|N-domain

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02207	zf-UBR	Putative zinc finger in N-recognin (UBR box)	Family	Interproscan
PF02617	ClpS	ATP-dependent Clp protease adaptor protein ClpS	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003126	Domain	Zinc finger, UBR-type	Interproscan
IPR014719	Homologous_superfamily	Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like	Interproscan
IPR003769	Domain	Adaptor protein ClpS, core	Interproscan
IPR039164	Family	E3 ubiquitin-protein ligase UBR1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21497	UBIQUITIN LIGASE E3 ALPHA-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0030163	Biological Process	protein catabolic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0071596	Biological Process	ubiquitin-dependent protein catabolic process via the N-end rule pathway	Interproscan