Detailed information of evm.model.HiC_scaffold_2.342 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:4391942...4404021
NR annotation: XP_012559008.1, tuftelin-interacting protein 11 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9UBB9Tuftelin-interacting protein 11 OS=Homo sapiens OX=9606 GN=TFIP11 PE=1 SV=1
A1XD94Tuftelin-interacting protein 11 OS=Macaca mulatta OX=9544 GN=TFIP11 PE=2 SV=1
A1XD93Tuftelin-interacting protein 11 OS=Pan troglodytes OX=9598 GN=TFIP11 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyGCFC

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01585G-patchG-patch domainFamilyInterproscan
PF07842GCFCGC-rich sequence DNA-binding factor-like proteinFamilyInterproscan
PF12457TIP_NTuftelin interacting protein N terminal FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000467DomainG-patch domainInterproscan
IPR022783DomainGCF, C-terminalInterproscan
IPR045211FamilyTFP11/STIP/Ntr1Interproscan
IPR022159DomainTuftelin interacting protein, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23329TUFTELIN-INTERACTING PROTEIN 11-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000390Biological Processspliceosomal complex disassemblyInterproscan
GO:0071008Cellular ComponentU2-type post-mRNA release spliceosomal complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13103TFIP11; tuftelin-interacting protein 11-Spliceosomeko03041deepkoala

TOP