Detailed information of evm.model.HiC_scaffold_2.397 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:4897012...4907989
NR annotation: XP_020917733.1, E3 ubiquitin-protein ligase MARCH1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5PQ35E3 ubiquitin-protein ligase MARCHF2 OS=Xenopus laevis OX=8355 GN=marchf2 PE=2 SV=1
Q28EX7E3 ubiquitin-protein ligase MARCHF2 OS=Xenopus tropicalis OX=8364 GN=marchf2 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12906RINGvRING-variant domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011016DomainZinc finger, RING-CH-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR046356FamilyE3 ubiquitin-protein ligase MARCHF4/9/11Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46053E3 UBIQUITIN-PROTEIN LIGASE MARCH4-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan

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