Detailed information of evm.model.HiC_scaffold_2.409 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:5042759...5054484
NR annotation: XP_047136370.1, transient receptor potential cation channel subfamily M member-like 2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7T1N0Transient receptor potential cation channel subfamily M member-like 2 OS=Nematostella vectensis OX=45351 GN=TRPM2 PE=1 SV=1
Q91YD4Transient receptor potential cation channel subfamily M member 2 OS=Mus musculus OX=10090 GN=Trpm2 PE=1 SV=2
E9PTA2Transient receptor potential cation channel subfamily M member 2 OS=Rattus norvegicus OX=10116 GN=Trpm2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01490Aa_transTransmembrane amino acid transporter proteinFamilyInterproscan
PF18139LSDAT_eukSLOG in TRPMFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013057DomainAmino acid transporter, transmembrane domainInterproscan
IPR041491DomainTRPM, SLOG domainInterproscan
IPR050927FamilyTransient receptor potential cation channel MInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13800TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0070838Biological Processmetal ion transportInterproscan
GO:0098655Biological Processmonoatomic cation transmembrane transportInterproscan
GO:0099604Molecular Functionligand-gated calcium channel activityInterproscan

TOP