Detailed information of evm.model.HiC_scaffold_2.425 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:5253494...5276288
NR annotation: XP_046846949.1, LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2C-like [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BRH4Histone-lysine N-methyltransferase 2C OS=Mus musculus OX=10090 GN=Kmt2c PE=1 SV=2
O14686Histone-lysine N-methyltransferase 2D OS=Homo sapiens OX=9606 GN=KMT2D PE=1 SV=2
Q8NEZ4Histone-lysine N-methyltransferase 2C OS=Homo sapiens OX=9606 GN=KMT2C PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00856SETSET domainFamilyInterproscan
PF05965FYRCF/Y rich C-terminusFamilyInterproscan
PF05964FYRNF/Y-rich N-terminusFamilyInterproscan
PF13832zf-HC5HC2H_2PHD-zinc-finger like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034732DomainExtended PHD (ePHD) domainInterproscan
IPR001214DomainSET domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR003888Conserved_siteFY-rich, N-terminalInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR003889Conserved_siteFY-rich, C-terminalInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR009071DomainHigh mobility group box domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45888HL01030P-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0042800Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09188MLL3; [histone H3]-lysine4 N-trimethyltransferase MLL3EC:2.1.1.354
Chromosome and associated proteinsko03036deepkoala

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