Detailed information of evm.model.HiC_scaffold_2.54 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:963493...995343
NR annotation: XP_037797777.1, zinc finger MYM-type protein 1-like [Penaeus monodon]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5
E7FKV8Polycystin-1-like protein 1 OS=Oryzias latipes OX=8090 GN=pkd1l1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000203Conserved_siteGPS motifInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan

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