Gene detail

Detailed information of evm.model.HiC_scaffold_2.605 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:7073971...7075886
NR annotation: XP_029207020.1, homeobox protein ceh-13-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P34684	Homeobox protein lin-39 OS=Caenorhabditis elegans OX=6239 GN=lin-39 PE=1 SV=1
P81192	Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=187800 GN=HOXA4 PE=3 SV=1
P09638	Homeobox protein Hox-B2 (Fragment) OS=Salmo salar OX=8030 GN=hoxb2 PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45664	PROTEIN ZERKNUELLT 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan