Gene detail

Detailed information of evm.model.HiC_scaffold_2.72 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_2:1181919...1196156
NR annotation: XP_048577845.1, semaphorin-5B isoform X2 [Nematostella vectensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9VTT0	Semaphorin 5c OS=Drosophila melanogaster OX=7227 GN=Sema5c PE=1 SV=3
Q13214	Semaphorin-3B OS=Homo sapiens OX=9606 GN=SEMA3B PE=1 SV=1
Q90663	Semaphorin-3D OS=Gallus gallus OX=9031 GN=SEMA3D PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01437	PSI	Plexin repeat	Family	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF01403	Sema	Sema domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002165	Repeat	Plexin repeat	Interproscan
IPR001627	Domain	Sema domain	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR027231	Family	Semaphorin	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR016201	Domain	PSI domain	Interproscan
IPR036352	Homologous_superfamily	Sema domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11036	SEMAPHORIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0001755	Biological Process	neural crest cell migration	Interproscan
GO:0030215	Molecular Function	semaphorin receptor binding	Interproscan
GO:0030335	Biological Process	positive regulation of cell migration	Interproscan
GO:0045499	Molecular Function	chemorepellent activity	Interproscan
GO:0048843	Biological Process	negative regulation of axon extension involved in axon guidance	Interproscan