Detailed information of evm.model.HiC_scaffold_21.164 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_21:1960212...1989636
NR annotation: CAH3121253.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6A009E3 ubiquitin-protein ligase listerin OS=Mus musculus OX=10090 GN=Ltn1 PE=1 SV=3
O94822E3 ubiquitin-protein ligase listerin OS=Homo sapiens OX=9606 GN=LTN1 PE=1 SV=6
E1C231E3 ubiquitin-protein ligase listerin OS=Gallus gallus OX=9031 GN=LTN1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04908SH3BGRSH3-binding, glutamic acid-rich proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR039795FamilyE3 ubiquitin-protein ligase listerinInterproscan
IPR006993FamilySH3-binding, glutamic acid-rich proteinInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12389ZINC FINGER PROTEIN 294Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005829Cellular ComponentcytosolInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0072344Biological Processrescue of stalled ribosomeInterproscan
GO:1990112Cellular ComponentRQC complexInterproscan
GO:1990116Biological Processribosome-associated ubiquitin-dependent protein catabolic processInterproscan

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