Gene detail

Detailed information of evm.model.HiC_scaffold_21.57 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_21:676093...680524
NR annotation: CAB4010875.1, LOW QUALITY PROTEIN: uncharacterized protein LOC110059725 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_21.57

ATGGAGAAGAAAGGTCTTTTGAGCGACGATGTCACGGATATGATTCGAGCTGCGATGAGAAGAATCGAAAGGCTGGAGGAAAGACAACGATTATCGACAGAACCTGCCTTACCCGAGCAACCTCAGCTTCAGCCTGCACCAAGCAACGCAGTGAGAGCATTTCAGCCACCCATGCGACAAAGGAGCAGCACACTGATACCAACAATGTTGCACAATGCTTCCAACCGCTCTCTTGCAATTAATCAAGATTTCAGgagATCATTTCCAAGTATTGGCGGAGGAGGAAGTAGACAATCGATAAGTCAAAGCCACATTCcagcaaagaaacaaaagaagcaGAATTATGTTTTCATTACCCCAAAGGAAAGCTGGACACACGACTTCTGCTTACTTGCGGATAAAACCACAAGCAAATCGCCTGCTCTCAAAACCCTTACAGCTTTGAAGGAGGCTGGACTTGGCAGAAGAAGAATCACGTTCGACAACAAAAGATCATCGCATGGGAAAGTTCGACAAGTCCTAGAAACAATTTTCCCGAAACTGAAAAGTCAAAACGGAGCTTTCGAACTGCTTCGAGCTGAACGGGGTGGAACATCGTGCAATTTGATCCTGATTGCCATGTCTGAACATGGCTATTCAGTCGATCATTTAAAGGAGCAAGTGTCTTCGAGCACTATCATCTACATTCGACCGATGCAAAGCAATTTACCGATGACTCCAGTCTTAACGAAAACAGATGATTCTATTAAGACCACCTGCTGCAAATGTAAGATGCAATTTCCACTTGGAGAAATGAAACAACATTTGCTTGAATGCTCAGAAGAAGGGTCGTATACTGCTAATGCAACTCATTTGCTCGATGACTCCTCGGATGTCGAAAGTCTCGCTAAACCCTCAACCTCTGAAATAACTGGTTATCCTGATCCTGAAAAAGAGCATGTTGACCTGCTGCAAAAAGGTGATTGGAGAAGGCATTTAACAGAACTGTTCCCCAAGCACAGTGATTTGCAAACGGAAGTGGCTTTACGGGAAGCTTCGTCGCTAGAAGAAGCTATAGAAAATATACTTGCTAATGAGCCGAATAAAAAAGAATATTCTAAGAGTAGCAATCTGAATCTTCCTTCTCTCTTGGAAGAATTTAGGAGATCGAATGAAAAAGATGAGATTGAGGAAATAGAAGTCGAAAGGGATGCTGTTTGggtaaatatattaaaatattacaAACGAAATGTCAGCAATCCACGGGCCTTGTGCAAAAGCTTAGAAGTATCTTTTAAAGGCGAAGAGGGTCTTGATGGTGGAGCTATGAAGGTCGAATATTTCAACTTGGCTTGGGATCACGTTACAACCAGGCTTTTTGAAGGAAATCCTGTTAGTCTGGTACCCATCAAAGACACCACCAAAAGGTTCCTTTTCCAACTTACAGGTATATTGATGGTTCACACTATTATGCAAAGCGGGCCTGTGAATAAATTTCCAAGGTTGTCTCCTTCTGTAGTTTCTTGTCTTCTGAAGGAGAGTGACGAGGAGATTTACAGCCTTCTTTCCAAGCACGACCTACCAATAAACGCATCAACTGAAAATGTTCATTTTCTGATCGAAGAGCTTGATGCTGCAAAAACCCACGAACAggttaaaacattgtttgatgaccATCCAAAGTGTGAAGCACATTGGCAGATTGTCAATGCATGTCACTGGCCAACAACAGAACAGATTTCCCTGCACAACAAACACACATTCATTCAAGAAATAATCTATAATGAAGTTATTCGATCCAGAAAAGAATTGGTTAGTGAAATGAAGCAGGGATTACAAATGCTTGGTTTCTTTCCCTTTTTGAAAAAGCATCCTCAACAGTTTAGAAAGCTTTTTTGTTCTCTGCAAAAGAAATTTGGTCCAGAAGATTTCAAGGCTCTGATCCAAGAAACGAAAACGAGCAGTTTTACCGAAAGACAAGCATGGGAATGGTTTCTTGAGTTCGTAAATGAAGGCGATTTGACTGTTTCAAAAGATGACCCAGAAAAGAGAGTCGTAGCGTTGCTGTCTTTTGCAACTGGCTGGCAATTGCCTCCAACAACAGAAGATTTCAAGATTAAACTTGAGTTTCTACCAGATGATGATTGTCATACACTGCCTACGTCATCAGCTTGTCTGCGAATATTACGCATCCCAACTGTACATTCAACGAAGTCGAAATTTAAAGAAGCAATGCTTGTTGCCCTTGAGCACGGTAGACAAGGCTTTCCCAACCCCTGA

Transcript

evm.model.HiC_scaffold_21.57

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000569	Domain	HECT domain	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan