Genomic Location: HiC_scaffold_21:798187...814237
NR annotation: XP_031565766.1, complement factor B-like [Actinia tenebrosa]
| CDS | ||||
| evm.model.HiC_scaffold_21.68 | ||||
| Transcript |
| evm.model.HiC_scaffold_21.68 |
| Protein |
| evm.model.HiC_scaffold_21.68 |
| Uniprot term | Description |
|---|---|
| P13944 | Collagen alpha-1(XII) chain OS=Gallus gallus OX=9031 GN=COL12A1 PE=1 SV=3 |
| Q60847 | Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 |
| Q99715 | Collagen alpha-1(XII) chain OS=Homo sapiens OX=9606 GN=COL12A1 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00057 | Ldl_recept_a | Low-density lipoprotein receptor domain class A | Repeat | Interproscan |
| PF00084 | Sushi | Sushi repeat (SCR repeat) | Domain | Interproscan |
| PF00089 | Trypsin | Trypsin | Domain | Interproscan |
| PF00092 | VWA | von Willebrand factor type A domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035976 | Homologous_superfamily | Sushi/SCR/CCP superfamily | Interproscan |
| IPR000436 | Domain | Sushi/SCR/CCP domain | Interproscan |
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR011360 | Family | Complement B/C2 | Interproscan |
| IPR002035 | Domain | von Willebrand factor, type A | Interproscan |
| IPR001254 | Domain | Serine proteases, trypsin domain | Interproscan |
| IPR023415 | Conserved_site | Low-density lipoprotein (LDL) receptor class A, conserved site | Interproscan |
| IPR036465 | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR036748 | Homologous_superfamily | MTH938-like superfamily | Interproscan |
| IPR009003 | Homologous_superfamily | Peptidase S1, PA clan | Interproscan |
| IPR036055 | Homologous_superfamily | LDL receptor-like superfamily | Interproscan |
| IPR043504 | Homologous_superfamily | Peptidase S1, PA clan, chymotrypsin-like fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46393 | SUSHI DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0004252 | Molecular Function | serine-type endopeptidase activity | Interproscan |
| GO:0005576 | Cellular Component | extracellular region | Interproscan |
| GO:0006956 | Biological Process | complement activation | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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