Detailed information of evm.model.HiC_scaffold_21.82 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_21:1036599...1061182
NR annotation: XP_031558032.1, neurogenic locus notch homolog protein 2-like isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35516Neurogenic locus notch homolog protein 2 OS=Mus musculus OX=10090 GN=Notch2 PE=1 SV=2
Q9QW30Neurogenic locus notch homolog protein 2 OS=Rattus norvegicus OX=10116 GN=Notch2 PE=1 SV=1
Q04721Neurogenic locus notch homolog protein 2 OS=Homo sapiens OX=9606 GN=NOTCH2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00066NotchLNR domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF07684NODPNOTCH proteinFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000800DomainNotch domainInterproscan
IPR011656DomainNotch, NODP domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR035993Homologous_superfamilyNotch-like domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR051355FamilyNotch and Slit guidance proteinInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR008297FamilyNotchInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45836SLIT HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:0050793Biological Processregulation of developmental processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20994NOTCH2; Notch 2-Endocrine resistanceko01522deepkoala

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