Gene detail

Detailed information of evm.model.HiC_scaffold_217.27 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_217:264560...300157
NR annotation: XP_028418814.1, LOW QUALITY PROTEIN: tigger transposable element-derived protein 4-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
F4JL11	Importin subunit alpha-2 OS=Arabidopsis thaliana OX=3702 GN=IMPA2 PE=1 SV=1
Q9SLX0	Importin subunit alpha-1b OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0155601 PE=1 SV=2
O00629	Importin subunit alpha-3 OS=Homo sapiens OX=9606 GN=KPNA4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00514	Arm	Armadillo/beta-catenin-like repeat	Repeat	Interproscan
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR000225	Repeat	Armadillo	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23316	IMPORTIN ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006607	Biological Process	NLS-bearing protein import into nucleus	Interproscan
GO:0008139	Molecular Function	nuclear localization sequence binding	Interproscan
GO:0061608	Molecular Function	nuclear import signal receptor activity	Interproscan