Genomic Location: HiC_scaffold_218:641203...683784
NR annotation: XP_031551488.1, RING finger protein 10-like [Actinia tenebrosa]
| CDS | |||||
| evm.model.HiC_scaffold_218.113 | |||||
| Transcript |
| evm.model.HiC_scaffold_218.113 |
| Protein |
| evm.model.HiC_scaffold_218.113 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q08E13 | E3 ubiquitin-protein ligase RNF10 OS=Bos taurus OX=9913 GN=RNF10 PE=2 SV=1 | ||||
| Q5XI59 | E3 ubiquitin-protein ligase RNF10 OS=Rattus norvegicus OX=10116 GN=Rnf10 PE=2 SV=1 | ||||
| Q8N5U6 | E3 ubiquitin-protein ligase RNF10 OS=Homo sapiens OX=9606 GN=RNF10 PE=1 SV=2 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF01302 | CAP_GLY | CAP-Gly domain | Domain | Interproscan |
| PF16641 | CLIP1_ZNF | CLIP1 zinc knuckle | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000938 | Domain | CAP Gly-rich domain | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR039739 | Family | RING-finger protein MAG2/RNF10 | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR036859 | Homologous_superfamily | CAP Gly-rich domain superfamily | Interproscan |
| IPR018957 | Domain | Zinc finger, C3HC4 RING-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR032108 | Domain | CLIP1, zinc knuckle | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12983 | RING FINGER 10 FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000976 | Molecular Function | transcription cis-regulatory region binding | Interproscan |
| GO:0045944 | Biological Process | positive regulation of transcription by RNA polymerase II | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10421 | CLIP1, RSN; CAP-Gly domain-containing linker protein 1 | - | Cytoskeleton proteins | ko04812 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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