Genomic Location: HiC_scaffold_229:59174...95558
NR annotation: CAH3034437.1, unnamed protein product [Pocillopora meandrina]
| CDS | |||||
| evm.model.HiC_scaffold_229.7 | |||||
| Transcript |
| evm.model.HiC_scaffold_229.7 |
| Protein |
| evm.model.HiC_scaffold_229.7 |
| Uniprot term | Description |
|---|---|
| F8VPK0 | Superkiller complex protein 3 OS=Mus musculus OX=10090 GN=Skic3 PE=3 SV=1 |
| Q6DFB8 | Tetratricopeptide repeat protein 37 OS=Xenopus laevis OX=8355 GN=ttc37 PE=2 SV=1 |
| Q6PGP7 | Superkiller complex protein 3 OS=Homo sapiens OX=9606 GN=SKIC3 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13432 | TPR_16 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF00787 | PX | PX domain | Domain | Interproscan |
| PF14559 | TPR_19 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF09325 | Vps5 | Vps5 C terminal like | Domain | Interproscan |
| PF13181 | TPR_8 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001683 | Domain | Phox homology | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR003107 | Repeat | HAT (Half-A-TPR) repeat | Interproscan |
| IPR027267 | Homologous_superfamily | AH/BAR domain superfamily | Interproscan |
| IPR039226 | Family | Ski3/TTC37 | Interproscan |
| IPR036871 | Homologous_superfamily | PX domain superfamily | Interproscan |
| IPR015404 | Domain | Sorting nexin/Vps5-like, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15704 | SUPERKILLER 3 PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0035091 | Molecular Function | phosphatidylinositol binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0006401 | Biological Process | RNA catabolic process | Interproscan |
| GO:0034427 | Biological Process | obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | Interproscan |
| GO:0055087 | Cellular Component | Ski complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12600 | SKI3, TTC37; superkiller protein 3 | - | Messenger RNA biogenesis | ko03019 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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