Detailed information of evm.model.HiC_scaffold_23.161 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:1713860...1724977
NR annotation: AIT76581.1, mesoglein, partial [Aurelia sp. 1 LSA-2014]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P19218Pancreatic secretory granule membrane major glycoprotein GP2 OS=Rattus norvegicus OX=10116 GN=Gp2 PE=1 SV=1
C0HK24L-rhamnose-binding lectin ELEL-1 OS=Echinometra lucunter OX=105361 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00100Zona_pellucidaZona pellucida-like domainFamilyInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR001507DomainZona pellucida domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR042235Homologous_superfamilyZona pellucida, ZP-C domainInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR039477DomainILEI/PANDER domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14002ENDOGLIN/TGF-BETA RECEPTOR TYPE IIIInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP