Detailed information of evm.model.HiC_scaffold_23.191 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:2151389...2369286
NR annotation: XP_047127072.1, otoferlin isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9ERC5Otoferlin OS=Rattus norvegicus OX=10116 GN=Otof PE=1 SV=2
Q9ESF1Otoferlin OS=Mus musculus OX=10090 GN=Otof PE=1 SV=1
Q5SPC5Otoferlin OS=Danio rerio OX=7955 GN=otof PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168C2C2 domainDomainInterproscan
PF08151FerIFerI (NUC094) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000008DomainC2 domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR037721FamilyFerlin familyInterproscan
IPR037724DomainFerlin, fifth C2 domainInterproscan
IPR037723DomainFerlin, fourth C2 domainInterproscan
IPR037722DomainFerlin, third C2 domainInterproscan
IPR012968DomainFerIin domainInterproscan
IPR037720DomainFerlin, second C2 domainInterproscan
IPR037725DomainFerlin, sixth C2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12546FER-1-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007009Biological Processplasma membrane organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19949OTOF; otoferlin-Membrane traffickingko04131deepkoala

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