Gene detail

Detailed information of evm.model.HiC_scaffold_23.301 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:3711939...3717169
NR annotation: XP_015748474.1, PREDICTED: uncharacterized protein LOC107328244 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P52176	Matrix metalloproteinase-9 OS=Bos taurus OX=9913 GN=MMP9 PE=2 SV=1
Q9ESM7	Protein sel-1 homolog 1 OS=Mesocricetus auratus OX=10036 GN=Sel1l PE=2 SV=1
P41245	Matrix metalloproteinase-9 OS=Mus musculus OX=10090 GN=Mmp9 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00040	fn2	Fibronectin type II domain	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000562	Domain	Fibronectin type II domain	Interproscan
IPR036943	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0038023	Molecular Function	signaling receptor activity	Interproscan