Detailed information of evm.model.HiC_scaffold_23.316 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:3868360...3926741
NR annotation: XP_020629673.1, peroxidasin homolog [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A4IGL7Peroxidasin OS=Xenopus tropicalis OX=8364 GN=pxdn PE=2 SV=1
Q92626Peroxidasin homolog OS=Homo sapiens OX=9606 GN=PXDN PE=1 SV=2
Q3UQ28Peroxidasin homolog OS=Mus musculus OX=10090 GN=Pxdn PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03098An_peroxidaseAnimal haem peroxidaseDomainInterproscan
PF06701MIB_HERC2Mib_herc2DomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF18346SH3_15Mind bomb SH3 repeat domainDomainInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR019791FamilyHaem peroxidase, animal-typeInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR010606DomainMib-herc2Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR037120Homologous_superfamilyHaem peroxidase domain superfamily, animal typeInterproscan
IPR037252Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR040847DomainMind bomb, SH3 repeat domainInterproscan
IPR034824DomainPeroxidasin, peroxidase domainInterproscan
IPR010255Homologous_superfamilyHaem peroxidase superfamilyInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24202E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004601Molecular Functionperoxidase activityInterproscan
GO:0006979Biological Processresponse to oxidative stressInterproscan
GO:0020037Molecular Functionheme bindingInterproscan

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