Detailed information of evm.model.HiC_scaffold_23.322 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:4005972...4035337
NR annotation: UUA79709.1, matrix metalloproteinase 17-2 [Nemopilema nomurai]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q11005Stromelysin-3 OS=Xenopus laevis OX=8355 GN=mmp11 PE=1 SV=1
P03956Interstitial collagenase OS=Homo sapiens OX=9606 GN=MMP1 PE=1 SV=3
P21692Interstitial collagenase OS=Sus scrofa OX=9823 GN=MMP1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan
PF00045HemopexinHemopexinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR000585DomainHemopexin-like domainInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR018486Conserved_siteHemopexin, conserved siteInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR036366Homologous_superfamilyPGBD superfamilyInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

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