Detailed information of evm.model.HiC_scaffold_23.397 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:5133530...5259313
NR annotation: XP_001636251.2, antizyme inhibitor 2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P09057Ornithine decarboxylase OS=Rattus norvegicus OX=10116 GN=Odc1 PE=1 SV=1
P00860Ornithine decarboxylase OS=Mus musculus OX=10090 GN=Odc1 PE=1 SV=2
P27119Ornithine decarboxylase OS=Mus pahari OX=10093 GN=Odc1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02784Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR022644DomainOrn/DAP/Arg decarboxylase 2, N-terminalInterproscan
IPR002433FamilyOrnithine decarboxylaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR029066Homologous_superfamilyPLP-binding barrelInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000183FamilyOrnithine/DAP/Arg decarboxylaseInterproscan
IPR009006Homologous_superfamilyAlanine racemase/group IV decarboxylase, C-terminalInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR051355FamilyNotch and Slit guidance proteinInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45836SLIT HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006596Biological Processpolyamine biosynthetic processInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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